Reports and Publications
Project CROOS Reports
Season Report to PFMC — September 2007 PDF
Final Report — March 2007
Cover and Introduction PDF
Part 2: Fleet Management | Genetics PDF
Part 3: Datalogger Management | Summary PDF
Part 4: Appendices PDF
Research Papers
Development of the project CROOS website: laying the groundwork for the future of fisheries research
By Christopher M. Pugmire
from Oregon State University's ScholarsArchive, November 14, 2007
Related Publications
Candidate loci reveal genetic differentiation between temporally divergent migratory runs of Chinook salmon (Oncorhynchus tshawytscha)
By K.G. O'Malley, M.D. Camara and M.A. Banks
from Molecular Ecology (2007) 16: 4930
Development of a standardized DNA database for Chinook salmon
By L.W. Seeb, A. Antonovich, M.A. Banks, T.D. Beacham, M.R. Bellinger, M. Campbell, N.A. Decovich, J.C. Garza, C.M. Guthrie III, P. Moran, S.R. Narum, J.J. Stephenson, K.J. Supernault, D.J. Teel, W.D. Templin, J.K. Wenburg, S.F. Young, and C.T. Smith
from Fisheries in review
Duplicated Clock genes with unique polyglutamine domains provide evidence for nonhomologous recombination in Chinook salmon (Oncorhynchus tshawytscha)
By K.G. O'Malley and M.A. Banks
from Genetica DOI 10.1007/s10709-007-9151-8
Stock identification for the conservation of threatened or endangered species
By M.A. Banks
from Stock identification methods. Elsevier Press. pp593-613
Which Genetic Markers and GSI Methods are More Appropriate For Defining Marine Distribution and Migration of Salmon?
By M.A. Banks
from North Pacific Anadromous Fish Commission Technical Note 5: 39-42
New tetranucleotide microsatellites for fine-scale discrimination among endangered Chinook salmon (Oncorhynchus tshawytscha)
By C. Greig, D.P. Jacobson and M.A. Banks
from Molecular Ecology Notes 3: 376-379
Which genetic loci have greater population assignment power?
By M.A. Banks, W. Eichert and J.B. Olsen
from Bioinformatics 19(11): 1436-1438
Rapid PCR-based species tests for threatened sympatric salmonids
By C.A. Greig, J.M Robertson and M.A. Banks
from Conservation Genetics 3(1): 83-86
Applications of population genetics to conservation of chinook salmon diversity in the Central Valley
By D. Hedgecock, M.A. Banks, V.K. Rashbrook, C.A. Dean and S.M. Blankenship
from Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Sacramento (CA): California Department of Fish and Game.
Analysis of microsatellite DNA resolves genetic structure and diversity of chinook salmon in California’s Central Valley
By M.A. Banks, V.K. Rashbrook, M.J. Calavetta, C.A. Dean and D. Hedgecock
from Canadian Journal of Fisheries and Aquatic Sciences 57: 915-927
WHICHRUN (version 3.2) a computer program for population assignment of individuals based on multilocus genotype data
By M.A. Banks and W. Eichert
from Journal of Heredity 91(1): 87-89
Isolation and Inheritance of Novel Microsatellites in Chinook Salmon (Oncorhynchus tschawytscha)
By M.A. Banks, M. Blouin, B.A. Baldwin, V.K. Rashbrook, H.A. Fitzgerald, S.M. Blankenship and D. Hedgecock
from Journal of Heredity 90(2): 281-288