Reports and Publications

Project CROOS Reports

Season Report to PFMC — September 2007 PDF

Final Report — March 2007
Cover and Introduction PDF
Part 2: Fleet Management | Genetics PDF
Part 3: Datalogger Management | Summary PDF
Part 4: Appendices PDF
Research Papers

Development of the project CROOS website: laying the groundwork for the future of fisheries research

By Christopher M. Pugmire

from Oregon State University's ScholarsArchive, November 14, 2007
Related Publications

Candidate loci reveal genetic differentiation between temporally divergent migratory runs of Chinook salmon (Oncorhynchus tshawytscha)

By K.G. O'Malley, M.D. Camara and M.A. Banks

from Molecular Ecology (2007) 16: 4930

Development of a standardized DNA database for Chinook salmon

By L.W. Seeb, A. Antonovich, M.A. Banks, T.D. Beacham, M.R. Bellinger, M. Campbell, N.A. Decovich, J.C. Garza, C.M. Guthrie III, P. Moran, S.R. Narum, J.J. Stephenson, K.J. Supernault, D.J. Teel, W.D. Templin, J.K. Wenburg, S.F. Young, and C.T. Smith

from Fisheries in review

Duplicated Clock genes with unique polyglutamine domains provide evidence for nonhomologous recombination in Chinook salmon (Oncorhynchus tshawytscha)

By K.G. O'Malley and M.A. Banks

from Genetica DOI 10.1007/s10709-007-9151-8

Stock identification for the conservation of threatened or endangered species

By M.A. Banks

from Stock identification methods. Elsevier Press. pp593-613

Which Genetic Markers and GSI Methods are More Appropriate For Defining Marine Distribution and Migration of Salmon?

By M.A. Banks

from North Pacific Anadromous Fish Commission Technical Note 5: 39-42

New tetranucleotide microsatellites for fine-scale discrimination among endangered Chinook salmon (Oncorhynchus tshawytscha)

By C. Greig, D.P. Jacobson and M.A. Banks

from Molecular Ecology Notes 3: 376-379

Which genetic loci have greater population assignment power?

By M.A. Banks, W. Eichert and J.B. Olsen

from Bioinformatics 19(11): 1436-1438

Rapid PCR-based species tests for threatened sympatric salmonids

By C.A. Greig, J.M Robertson and M.A. Banks

from Conservation Genetics 3(1): 83-86

Applications of population genetics to conservation of chinook salmon diversity in the Central Valley

By D. Hedgecock, M.A. Banks, V.K. Rashbrook, C.A. Dean and S.M. Blankenship

from Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Sacramento (CA): California Department of Fish and Game.

Analysis of microsatellite DNA resolves genetic structure and diversity of chinook salmon in California’s Central Valley

By M.A. Banks, V.K. Rashbrook, M.J. Calavetta, C.A. Dean and D. Hedgecock

from Canadian Journal of Fisheries and Aquatic Sciences 57: 915-927

WHICHRUN (version 3.2) a computer program for population assignment of individuals based on multilocus genotype data

By M.A. Banks and W. Eichert

from Journal of Heredity 91(1): 87-89

Isolation and Inheritance of Novel Microsatellites in Chinook Salmon (Oncorhynchus tschawytscha)

By M.A. Banks, M. Blouin, B.A. Baldwin, V.K. Rashbrook, H.A. Fitzgerald, S.M. Blankenship and D. Hedgecock

from Journal of Heredity 90(2): 281-288